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pets

https://rubygems.org/gems/pets
PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

Total

Ranking: 86,102 of 186,698
Downloads: 9,714

Daily

Ranking: 15,812 of 186,685
Downloads: 18

Depended by

RankDownloadsName

Depends on

RankDownloadsName
12,900,560,356bundler
101,125,994,016rake
27908,151,619rspec
45645,036,413parallel
124328,754,687terminal-table
46693,576,737net-http
1,65718,711,426net-ftp
2,6726,274,741numo-narray
3,5853,039,318statistics2
6,288760,780npy
29,94942,447bio-vcf
67,02314,256report_html
85,9579,739NetAnalyzer
88,3349,304semtools
176,9671,671expcalc

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1iconseoanezonjic
2iconElenaRojano