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pets

https://rubygems.org/gems/pets
DEPRECATED PROJECT. MIGRATED TO PYTHON: https://github.com/seoanezonjic/pets. PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

Total

Ranking: 83,526 of 186,947
Downloads: 10,352

Daily

Ranking: 46,383 of 186,938
Downloads: 14

Depended by

RankDownloadsName

Depends on

RankDownloadsName
12,936,839,016bundler
101,139,345,512rake
27913,996,669rspec
45655,317,938parallel
122334,629,703terminal-table
44398,546,948net-http
1,65719,107,537net-ftp
2,6826,323,462numo-narray
3,6033,045,628statistics2
6,326761,926npy
29,80843,143bio-vcf
66,24414,696report_html
84,34410,188NetAnalyzer
86,1059,844semtools
176,0941,887expcalc

Owners

#GravatarHandle
1iconseoanezonjic
2iconElenaRojano