| 1 | 13,572 | 35,214 | shannon | Simple gem to calculate Shannon entropy. |
| 2 | 17,678 | 66,923 | parse_fasta | Provides nice, programmatic access to fasta and fastq files, as well as providing Seque... |
| 3 | 18,621 | 66,923 | iroki | Command line app and library code for Iroki, a phylogenetic tree customization program. |
| 4 | 33,522 | 35,214 | aai | Calculate Seanie's amino acid similarity score between multiple genomes/bins. |
| 5 | 46,015 | 66,923 | tree_clusters | Snazzy code for working with each cluster in a tree. |
| 6 | 48,484 | 15,956 | rya | My personal library |
| 7 | 62,852 | 43,406 | abort_if | Easy error logging and assertions.. |
| 8 | 67,033 | 66,923 | pasv_lib | Library code for PASV |
| 9 | 72,463 | 66,923 | matr | Deal text file matrices. |
| 10 | 74,765 | 22,483 | big_simon | Viral host discovery pipeline. |
| 11 | 80,440 | 66,923 | stat_c | Fast, well documented C stats extension for Ruby. |
| 12 | 95,433 | 43,406 | coutinho_assembly | Run Coutinho's assembly pipeline. |
| 13 | 98,411 | 30,535 | shaq_lib | Library code for Shaq assembler |
| 14 | 112,623 | 66,923 | nr_test | test |
| 15 | 124,271 | 66,923 | lsa | Latent semantic analysis pipeline for genomes and metagenomes |
| 16 | 124,737 | 66,923 | wind | My personal Ruby core extensions including a super fast buffered version of each_line. |
| 17 | 153,624 | 66,923 | iroki_lib | Library code for Iroki, a phylogenetic tree customization program. |
| 18 | 159,965 | 66,923 | blosum | Common substitution matrices for sequence alignment. |
| 19 | 164,363 | 66,923 | zeta_hunter | Library code for ZetaHunter. |
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