| 1 | 8,386 | 9,429 | iruby | A Ruby kernel for Jupyter environment. |
| 2 | 20,765 | 12,467 | libui | Ruby bindings to libui |
| 3 | 23,845 | 31,092 | ruby-gr | GR framework - the graphics library for visualisation - for Ruby |
| 4 | 39,624 | 13,369 | red-candle | Ruby gem for running state-of-the-art language models locally. Access LLMs, embeddings,... |
| 5 | 40,461 | 24,251 | youplot | A command line tool for Unicode Plotting |
| 6 | 40,866 | 57,584 | minimap2 | Ruby bindings to the Minimap2 aligner. |
| 7 | 42,384 | 12,750 | umappp | Umappp wrapper for Ruby |
| 8 | 42,516 | 41,879 | gray_scott_gtk3 | Reaction diffusion system (Gray-Scott model). |
| 9 | 43,108 | 105,941 | htslib | HTSlib bindings for Ruby |
| 10 | 55,425 | 41,879 | rdatasets | Ruby package for loading classical data sets vailable in R |
| 11 | 67,935 | 57,584 | ffi-bitfield | Provides bit field support for FFI::Struct and FFI::ManagedStruct |
| 12 | 75,050 | 57,584 | ruby-igv | Control IGV (Integrative Genomics Viewer) with Ruby. |
| 13 | 77,024 | 57,584 | yardview_gtk3 | Simple GUI application to show the yard documents of installed Gems. |
| 14 | 83,536 | 105,941 | libssw | Ruby bindings for libssw |
| 15 | 84,494 | 41,879 | bio-twobit | This is a Ruby binding for lib2bit(https://github.com/dpryan79/lib2bit), which provides... |
| 16 | 99,109 | 105,941 | edlib | Lightweight, super fast C/C++ library for sequence alignment using edit (Levenshtein) d... |
| 17 | 102,236 | 57,584 | rubio-radio | Rubio is a simple radio player written in Ruby. |
| 18 | 113,304 | 35,210 | c2ffi4rb | Import C2FFI JSON to ruby/ffi |
| 19 | 115,052 | 24,251 | bio-bigwig | This is a Ruby binding for libBigWig (https://github.com/dpryan79/libBigWig), which pro... |
| 20 | 120,306 | 105,941 | multipull | Git pull multiple repositories at once |
| 21 | 127,877 | 41,879 | bio-cgranges | Genomic interval overlap queries |
| 22 | 129,156 | 31,092 | daru-apiclient | Get JSON data from RestAPI with httparty and create Daru::DataFrame. |
| 23 | 129,401 | 57,584 | biocgem | biocgem command line tools |
| 24 | 149,584 | 57,584 | json_viewer_gtk3 | Simple GUI Json Viewer |
| 25 | 163,044 | 105,941 | gr-plot | GR's matlab-like high-level API. |
| 26 | 166,920 | 105,941 | red-amber-view | A Data Viewer for RedAmber. Opens a window and displays a spreadsheet-like table. |
| 27 | 95,002 | 21,074 | openai-gym-ruby | OpenAI gym interface for Ruby (for fun, not for serious use) |
| 28 | 175,861 | 57,584 | minibwa | Ruby bindings for minibwa, a short-read aligner |
| 29 | 175,886 | 57,584 | dratools | DDBJ Search を使って DRA/SRA ファイル URL を解決し、DDBJ から取得する小さな CLI とライブラリです。 |
| 30 | 177,126 | 105,941 | miniflow | A very small tool to help you execute workflows |
| 31 | 178,194 | 57,584 | bwa2 | bwa2 |
| 32 | 179,999 | 196,402 | rinruby-edge | RinRuby is a Ruby library that integrates the R interpreter in Ruby, making R's statist... |
| 33 | 181,518 | 105,941 | ruby-minigraph | Ruby bindings for minigraph (bioinformatics) |
| 34 | 184,350 | 57,584 | alglib4 | ALGLIB wrapper for Ruby |
| 35 | 185,312 | 57,584 | libcall | Call functions in shared libraries directly from the CLI |
| 36 | 187,036 | 57,584 | ruby-igraph | Library for the analysis of networks |
| 37 | 189,372 | 41,879 | ruby-hdf5 | hdf5 |
| 38 | 191,545 | 41,879 | biosyntax | Ruby native binding for libbiosyntax |
| 39 | 160,076 | 49,230 | ffi-bitstruct | bit fields for Ruby-FFI |
| 40 | 193,786 | 105,941 | togows | togows provides a small Ruby command line interface for TogoWS entry, search, convert, ... |
| 41 | 168,700 | 12,983 | twobit | This is a Ruby binding for lib2bit(https://github.com/dpryan79/lib2bit), which provides... |
| 42 | 160,864 | 33,085 | grayscott | Reaction diffusion system (Gray-Scott model). |
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