Dariogf's Gems

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#Total RankDaily RankNameSummary
111,87786,038scbi_multi_gz_readerWrapper to read gz/gzip files composed of multiple gz streams (eg, made by doing a cat...
218,46728,793seqtrimnextSeqtrimnext is a plugin based system to preprocess and clean sequences from multiple NG...
329,06953,556full_lengther_nextFULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
438,78186,038scbi_blastscbi_blast is a ruby gem to handle blast+ executions using pipes when possible to read ...
541,86653,556scbi_mapreducescbi_mapreduce brings parallel and distributed computing capabilities to your code, wit...
645,96153,556scbi_cominerscbi_cominer is a ruby gem to calculate some interesting regions and statistics from co...
746,32686,038scbi_fastqscbi_fastq is a ruby gem to read/write FASTQ files (DNA/RNA sequences) with qualities i...
866,86453,556scbi_plotscbi_plot is a simplified wrapper to create plots with gnuplot.
968,82053,556seqtrimnext_reportA PDF report generator for SeqtrimNEXT preprocessing software from SCBI.
1089,24686,038scbi_fqbinRead/write compressed fastq or fasta files in fqbin format
1192,31186,038scbi_fastascbi_fasta is a ruby gem to read FASTA+QUAL files (DNA/RNA sequences).
1299,61586,038scbi_distributed_blastscbi_distributed_blast is a simple distribution mechanism for blast+ made on top of scb...
1399,65886,038scbi_queue_systemscbi_queue_system (SQS) handles a simple queue of jobs executions over multiple machine...
14100,15953,556scbi_headersscbi_headers is a gem that provides consistent text headers for command line applications.
15105,76586,038use_case_diagramA gem to generate user cases in UML using dot
16111,26386,038scbi_zcatRead files from a zcat pipe of a gz file. Useful to read multiple gz streams that are s...
17119,48386,038scbi_mathscbi_math is a ruby gem based on narray to do some additional statistics,
18135,89086,038scbi_acescbi_ace is a ruby gem to read and parse ACE files containing contigs. It automatically...
19136,17186,038scbi_testcodescbi_testcode is a ruby gem that checks if a genetic sequence is coding or not based on...
20155,20386,038scbi_goGeneOntology tools to summarize and graph go terms