Mooreryan's Gems

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#Total RankDaily RankNameSummary
114,27121,493shannonSimple gem to calculate Shannon entropy.
218,60257,531parse_fastaProvides nice, programmatic access to fasta and fastq files, as well as providing Seque...
319,51957,531irokiCommand line app and library code for Iroki, a phylogenetic tree customization program.
433,09794,537aaiCalculate Seanie's amino acid similarity score between multiple genomes/bins.
545,90194,537tree_clustersSnazzy code for working with each cluster in a tree.
647,97294,537ryaMy personal library
762,21026,330abort_ifEasy error logging and assertions..
867,14494,537pasv_libLibrary code for PASV
972,09594,537matrDeal text file matrices.
1073,87636,032big_simonViral host discovery pipeline.
1182,04894,537stat_cFast, well documented C stats extension for Ruby.
1292,53624,666coutinho_assemblyRun Coutinho's assembly pipeline.
1398,20294,537shaq_libLibrary code for Shaq assembler
14112,44457,531nr_testtest
15124,06494,537lsaLatent semantic analysis pipeline for genomes and metagenomes
16125,76657,531windMy personal Ruby core extensions including a super fast buffered version of each_line.
17153,08594,537iroki_libLibrary code for Iroki, a phylogenetic tree customization program.
18162,59994,537blosumCommon substitution matrices for sequence alignment.
19166,41857,531zeta_hunterLibrary code for ZetaHunter.