Mooreryan's Gems

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#Total RankDaily RankNameSummary
114,89867,232shannonSimple gem to calculate Shannon entropy.
219,33660,867parse_fastaProvides nice, programmatic access to fasta and fastq files, as well as providing Seque...
320,2089,958irokiCommand line app and library code for Iroki, a phylogenetic tree customization program.
433,776111,482aaiCalculate Seanie's amino acid similarity score between multiple genomes/bins.
546,85888,523tree_clustersSnazzy code for working with each cluster in a tree.
648,73288,523ryaMy personal library
762,35047,418abort_ifEasy error logging and assertions..
868,096111,482pasv_libLibrary code for PASV
973,46828,395matrDeal text file matrices.
1074,474111,482big_simonViral host discovery pipeline.
1183,945111,482stat_cFast, well documented C stats extension for Ruby.
1293,79347,418coutinho_assemblyRun Coutinho's assembly pipeline.
13100,060111,482shaq_libLibrary code for Shaq assembler
14113,417111,482nr_testtest
15125,57450,777lsaLatent semantic analysis pipeline for genomes and metagenomes
16127,942111,482windMy personal Ruby core extensions including a super fast buffered version of each_line.
17156,00867,232iroki_libLibrary code for Iroki, a phylogenetic tree customization program.
18165,492111,482blosumCommon substitution matrices for sequence alignment.
19170,090111,482zeta_hunterLibrary code for ZetaHunter.