| 1 | 67,030 | 35,491 | exodb | A library for exome sequencing data management |
| 2 | 72,728 | 43,199 | hgncrest | HGNC REST Ruby API |
| 3 | 92,939 | 56,700 | sylfy | Systems Biology Library for Ruby |
| 4 | 93,618 | 85,896 | ensemblrest | Ensembl REST Ruby API |
| 5 | 106,905 | 132,322 | bio-freebayes | The API for Freebayes version #{Bio::Freebayes::EXTVERSION} |
| 6 | 127,901 | 104,632 | dactyls | MongoDB ruby interface for systems biology data |
| 7 | 140,744 | 132,322 | bio-sparql-client | A ruby wrapper for bio SPARQL service |
| 8 | 141,138 | 173,064 | bio-picard | API of Picard tool |
| 9 | 141,235 | 104,632 | ghrub | Graph database ruby library for systems biology data |
| 10 | 145,327 | 132,322 | bio-conduit | A pipeline creator for bioruby |
| 11 | 148,761 | 132,322 | mothi | Database data structure and interface for systems biology data |
| 12 | 153,312 | 132,322 | pgm | A ruby library for probabilistic graphical model |