| 1 | 67,710 | 41,737 | exodb | A library for exome sequencing data management |
| 2 | 73,681 | 41,737 | hgncrest | HGNC REST Ruby API |
| 3 | 93,271 | 94,007 | sylfy | Systems Biology Library for Ruby |
| 4 | 94,691 | 94,007 | ensemblrest | Ensembl REST Ruby API |
| 5 | 107,635 | 94,007 | bio-freebayes | The API for Freebayes version #{Bio::Freebayes::EXTVERSION} |
| 6 | 129,141 | 129,210 | dactyls | MongoDB ruby interface for systems biology data |
| 7 | 141,778 | 129,210 | bio-sparql-client | A ruby wrapper for bio SPARQL service |
| 8 | 142,261 | 94,007 | bio-picard | API of Picard tool |
| 9 | 142,370 | 129,210 | ghrub | Graph database ruby library for systems biology data |
| 10 | 146,338 | 129,210 | bio-conduit | A pipeline creator for bioruby |
| 11 | 150,470 | 94,007 | mothi | Database data structure and interface for systems biology data |
| 12 | 154,719 | 94,007 | pgm | A ruby library for probabilistic graphical model |