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pets

https://rubygems.org/gems/pets
PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

Total

Ranking: 87,444 of 183,509
Downloads: 9,015

Daily

Ranking: 43,933 of 183,501
Downloads: 8

Depended by

RankDownloadsName

Depends on

RankDownloadsName
12,459,455,183bundler
10970,378,207rake
25825,653,379rspec
53530,522,130parallel
130269,983,923terminal-table
97339,662,379net-http
1,75513,766,544net-ftp
2,6775,212,835numo-narray
3,3882,963,592statistics2
5,959754,849npy
29,81140,185bio-vcf
66,56113,691report_html
87,4809,009NetAnalyzer
88,4678,833semtools
175,7231,472expcalc

Owners

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1iconseoanezonjic
2iconElenaRojano